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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116196290, gi...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVADQVRR LDARVDRVSL VPLTHVQDRD GELQATDASA LASPRLNELL AITKALSSGS  60
   61 ISGAHLSSSR IQRLLLQSGL TEELPSLELL EAKSQYETDV EWLLVSKATV QTYGLLMSTL 120
  121 LDQIIPLSDD IWYWDEVMTS YPYSFVYAVQ TSPLRMWRWS REVYSDSVHR FQRLYRDEFP 180
  181 GHASEAEDMS LAQEDGSDAT RELKGFKTIY PSLSRHWFQF YGIVRQSVTE RSIADIQRKI 240
  241 LSRVDIGRSE ARSKQKRLRR LREMTATGLG VLMDEGLNFG VTEETSNEEW KGMLERSVAL 300
  301 MDMILQSVVY LDLSVSEFED KVFAGVEEDP ELSIHMEDLH PAERPTVLAR RLLGLLERGL 360
  361 PNHRVAITDL ADENGRPSRL VRYWLPAAAL LVSSSTILRI LINRQDDIVN WVRDFGATAR 420
  421 DFWFNWVIDP VRKIIGTIRH DSNSEIAIMS RDSLKADRDS LERMVVEFAM DNPDVAVGNS 480
  481 SITDLEINDI RSKVKAGDVT PVLKAYEKDM RRPIVGAIKG DLVRSLLIQV QKTKVDLEVA 540
  541 ISGIDALLKS QELVFGFVGL TPGVLVSIGV FQYLRTVFGS RKGMRQGRQV RRSVRVLRKI 600
  601 DRILSEATTS QNNIISYRDH GLLVCEVHVL RGLAHDVLPG DVEKEFIEDL DELANLKGIQ 660
  661 VQMKALERIR WAYAEWLGGM K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle