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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88180170, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRLRRLQP RTSLSAVSRA LRTTPSCSRQ RAFRTACASS TSVGRITRSF PGPERRIRAA  60
   61 SHVVFPAAFV AGQRRRASVV AAEAVENTNT EDIGPIQEYD RRVANGLLRN DEHQRGIIQS 120
  121 LQHLHEELRH YHAPPVVQPT IESLKPSKSL FSWFGSKTPI RAIPSNLPRG LYLYGDVGCG 180
  181 KTMLMDLFYD TLPASVRSKT RIHFHNFMQS VHQRLHKMKL QHGGDVDCVP FVAAEIAEQG 240
  241 NVLCFDEFQC TDVADAMILR RLLESLMSHG VVLVTTSNRH PDELYKNGIQ RESFLPAIHL 300
  301 LKTRLHVINL DSTTDYRKIP RPPSGVYHTP LDAHAASHAE KWFRFLGDPD TLTPHQEVQR 360
  361 VWGREIVVPR VSGRCAWFTF DELIGRAAGA ADYLELMRSY DAFVVTEVPG MTFRQRDLAR 420
  421 RFITFVDAVY ESHAKLVLTT AVPLQELFIS RAEMRESLAA RRRQEQAAQA KGGGVAAKDD 480
  481 DDGVEAALDD AADQMMDDLE QSAGQLAKSN LFSGDEEAFA FARALSRLSH MGSREWVERG 540
  541 MGLESQGGKP EHDSWAKTRS RQMEDSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle