YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116194442, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLYLLPIST RRTLLYCQHL NLPASEKPTW SNWLQAKAAR TWSGWEKKEK GWQKSVVNYG  60
   61 NQALRRIPYE EWGLKSVPPL SQRRRQVELK GAEKVEVVYP KSLLAMDKVP QILKSLATDR 120
  121 EALHKKRLIW CFVGMPITAP VAIVPVIPNL PFFYLVYRAW SHWRALSGGK HLQFLLKNNL 180
  181 LALTPSPVVD AVYAAQKEPL PSTPERTTDS DEKIVENLDP ASPNGAQDPD GETMLLSQAN 240
  241 GKRMTQALDL PQLEVELERA IWQVETAIKK RSAEVAAKNA QGPANENEKK S

Type	Start	End	Confidence
Cytoplasmic	1	127	0.83
Transmembrane Helix	128	148	0.79
Non-Cytoplasmic	149	291	0.88