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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116200341, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAPHATAPG VSRPISCHHV LGLDSLTLPV FRPPGLPSNN IVESLGRDPV QLASSSILRN  60
   61 QESSVRQSWM TMSIHPDLSV GATATETEPP TLKKTQSHDT PGHLESRAPS VEKQDEKSIS 120
  121 NDILVLPDTS LALGGEKHAV DVAETEYPGG FKLLSIILAL VMGIFLASLD MTIVATAIPK 180
  181 ITDEFHGLEK VSWYSAAFFM TNGGFQSSWG KAYRYFPLKF TFLMAIAVFE LGSLICAVAP 240
  241 NSTALIVGRA INGLGAAGIG TGAYTIIAFV AKPSKRATYT GFVGMSFGVA CVVGPLIGGV 300
  301 FADKVTWRWC FWINLPIGGL SALIIFFFFQ PPSAAKPVHA PWRERLLQMD PVGVALVMGA 360
  361 IVAFMLALQY GGQTAPWNSS VVIGLLVGFL LITVAFIVWE LFQGERALVV PRLFKQRAIC 420
  421 ISCFFASIFV GSYYLVIYYI PIYFQSVGNA SPTMSGVYNL PLIIATTISM IMSGMLISAS 480
  481 GLAVPIQVGG ATIGVIAAGL LYTLDVDTGI EKWIGYQLLG GVGWGLAFQV PIIVGQANAD 540
  541 PEDISSVTAM ILFFQCIGGT AFVTAAQAAF VNQMIYTLPN SAPDVDPASV VTTGATLIWA 600
  601 AFPADQVHGI IVAYMAGIKV ALGISIGGAG LGLAICLCKA DLGRESRGFE LWSVYNPPAG 660
  661 ENVPRALQGQ PRPSHPVVLA GDFNLKNPLW DGFGRYDRKS EDLLQLGSLW DLTIRTPRGA 720
  721 TTRAPQGRQR GRPSTIDHFW TSENLQTVYY GEECRGKSDH YPQVLEVGEG HGPRPTQPDG 780
  781 WAWKKMDRER VKAESELLCK VMGLADPGPD GLPAKTRTVE GLDKAFDSLV EWLTWVAKES 840
  841 TPRKKASCGY SSPWWTVEVQ QAAREARRAE RLAKETRAEY CWEELSERLK DLARTTREAR 900
  901 TRAWRNSLQE ASEAKKPDQM WSLERWARLR SFLPPEPPRL PEFKDSSGQV TAETHDQKAS 960
  961 ALAESDADRD HGGDGKSKPL EGARLGFAPR WAFLKGVRST VSLKCPALSG DKVPGARMVP1020
 1021 RARFKRAKTV VLPKPGKAPP AYQTPGGYRP IALLPTLGKV IESVVARKVT QAAEVNGLLP1080
 1081 DEQMGNRAHR STELAVRLVV AQVQEAWRQK GAASLLQLDI SGAFDTVNHT RLLATLREMG1140
 1141 FPRWLVLWTR DWLTGREATL LFDGKTAAPT AIRAGVPQGS PLSPVLFILY ISSLYRQLKD1200
 1201 EHPHLAITGF ADDTNLLVFG RNPEAHVRQL EAAWETCIRW ADSRGMKFAP EKSELIHFNK1260
 1261 GRRQWTEQVN LANPGGGTSP VKPEGSARFL GVWLDWKLNW KAHLVAVEKK LRTQSYALSR1320
 1321 IVAKTWGMGL AKAREVYTKC IRSALAYGAS SFHIPTDVGG EPAKKGITKA LGKAQNKSLR1380
 1381 IVAGAFKSTP IRNLETETWV PPLDLYLNKR LADFENRLQR PDLDDGRGGK KTAASVVLTA1440
 1441 CRKIQQRLSS RRGNRGRPRT LGPQGPTAVE RAAGTVMRWT GGAVDTNRVV EEAWKARWLK1500
 1501 ERDGRAITRP ADDFDHQQET LFRNETLRRH DGLSKAKSSL LIQIRTGAIG LRDFLFTRGV1560
 1561 PEVLTPACEC GEGRETAEHL VVWCLAPPLT RRWERTGIRT RRDFYSVLHG INPTTARLAR1620
 1621 RVLDWLMDSG KLPMYNLARR LELEAAA

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