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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116199663, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCAADWGTEN QSTSAPFIES TDALEAESLK ILPPSAFSSP SPNRPAGLRA QQAAASTGQT  60
   61 PPGNLDRGGS PQRTTSDNPS DNPSDQIELQ PYPTAAEKYR DFANERQRLY DIKRAEKRRW 120
  121 LEQQDEMKFS HSIQFNAVPD WSNHYIAYSN LKKLIYQLEK AIHQPAGDAE SRPLIQDDNP 180
  181 EAVFGRALDV ELEKITSFYV LKENELFDEV DLLLKDAEEF EEEAGVIDEA RPPSRPLERT 240
  241 TSNPGRLRRG STRSQLSTED GMEEDSDEEG DEETGLTSKR RSRSLGGRGG MRNSMMASTD 300
  301 MTASTDFTRS VRRMSMNYDD YAEQAALFSS GIMLKKRMIN IYVQLCELKS YIQLNRTGFS 360
  361 KVLKKFDKII DRRLRPKYMS TFVDTAYPFR ADTTRGLEER ITQMVQAYSV IVTHGDSETA 420
  421 IRDLRSHLRE HVVWERNTVW RDLIGLERRA EAASLGHTLL GVDADAQRTR LQGDDEIVLP 480
  481 TKEITTPLGR LVCPTWLLTS TTLTLVIIIA LFFAILYTPI MEKAEQQNCL AMLVLVSLLW 540
  541 ATEALPLFVT SLLIPFLCVV LQVFRDKEKP HARLGSKDAT AAVFAAMWTP VIMLLLGGFT 600
  601 LAAALSKCGI DKRIATFVLS KAGTRPKTVL IANMAVAAVA SMLISNVAAP VLCFGIIEPM 660
  661 LRNLPAGSPM SKAVIIGIAL ASNIGGMLSP IASPQNVVAI GIMEPPPTWG QWFFIALPVG 720
  721 IISLFFIWLF LLIAFKPGRG TTIVPVRPVR DEFTGVQWFV SAVTIATIGL WCASHSLESV 780
  781 FGDMGVIAII PIVLFFGVGI LTKEDFNNFP WTIIILAAGG LSLGKAVNSS GLLHTATRAI 840
  841 TEHVEEYSLY GILVVFSSLI LVIATFISHT VAALIILPLV YNVGKGLDEP HPNLLVMAGV 900
  901 LMCSAAMALP TSGFPNMTAI MKEDPAGQRY LKVKHFIRVG VPSSIISLVV TVTVGYVAMR 960
  961 VTGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle