YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116199551, gi...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKCETVGQR YARAKAVVNA WAETERDTAA SFLMYQSGLN LSRSVDSKPP HNPNHAVEVN  60
   61 PAKDGRPSSP TAEEDSLEQT TFRWSRTLPL FAAALIIASI SIFNYQKLSS PVVGATLYAL 120
  121 RTSEKARAHL GDEIYFAQQI PWISGEMNQL HGRIDITFRV KGTRGGGVMR FTSFRPSPRG 180
  181 MFETTEWSLE TDDGVVIDLL EDGDPFKAIT GAEGPIEMVD LEEEESSAAA TRGFRKMNK

Type	Start	End	Confidence
Cytoplasmic	1	86	0.67
Transmembrane Helix	87	103	0.72
Non-Cytoplasmic	104	239	0.92