YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88178794, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEEPPNPM AESGITIPSD SEQYSRHGDQ STSPPSSSSP AVILYQPPTI WSILRGAAIN  60
   61 LFLPFVNGMM LGFGELFAHE AAFRLGWSNT RRLLQALRAS NRFLAVPNSR QRRFIQRAEI 120
  121 LEPRSFQVLS NVPPLDYPTI CQGLRPLPAT DPPKTFGTAR QDASQQEPSP AKPRAGACKS 180
  181 RFGTALRNNR VALHGASTAR RIGGPVAFGL ASQRPTFANQ QSRNASTQPT IAPTSASDVS 240
  241 NLADVTGTPV NLTGSDLLDI PEQIGFLKTL GLEFGWGPTS LMQTVLESVY VYTGLPWWAS 300
  301 IAMVAVGLRV ALLKPTLDAS ENTVKYQKLL KNPEYAAAME DMKSLMITGN HMAGAQARAK 360
  361 VSLMNKEAGY SLWKNFAPML QLPLGYGMFR LIKGMSALPV PSFETGGILW FTDLTAADPL 420
  421 FIMPIVTGLV VMVGMRIPLP YMAPQQQQTM KTMALVIMPL STAVGLFLPS GLTLYFLLSS 480
  481 VLHTFQTYMM HQHWFRRMVG LRPLDDPARA GAMTWQAPRI VDMTAPRVTP IRPSAPPASE 540
  541 SVYASLQSSI ASAREKLNQR SDNDAAKRAQ KAAQQYEEKR ALEEKEKIIG RLQKRKGRQH 600
  601 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle