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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88178610, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRIVRTIV QTTTAAVFTF IVIFFLDRNY RVLPNSIHGY LPSHHTGTVV TDITLKKCSS  60
   61 LNLFSSCKLD ATVWHRIDKD LYLGRGMFSS AYLHIQRKRE EELTPEDKVV IDVSVGRLNP 120
  121 DVMAAKSSGN KVARGAPENG DQASGEEKWE LRDGGLWIKR SNKRGVSDSK SAVTGVDVLF 180
  181 GDDAVEARPG WEITTGTAML LDGGSGILPA HVTIRRGAEH EPYQPVPKIM DNGRFKIMQL 240
  241 ADLHLSTGVG KCRDAVPEDW NGGKCEADPR TLEFVEKILE EEKPNMVVLS GDQVNGETAP 300
  301 DAQTAIFKYA QILIKHKIPY ACIFGNHDDE GSMSRSLQME LIEKLPYSLS KAGPADIDGV 360
  361 GNYYVEVLAR GSSGHSAITV YLLDSHSYSP NERKFKGYDW IKQNQIDWFR KTAQSLKRSH 420
  421 KEYTHHHMDV AFIHIPIPEY TYPNLTLVGE WKEPSTAPAY NSGFYDALVG EGISMVSCGH 480
  481 DHVNEHCGLS YTEDAKPALW MCHGGGVGFG GYAGYGGFYR KIRIFDFNMN EARITTWKRV 540
  541 EHGPDVNKRL EELILVDAGR VVAPMQE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle