YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116198107, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLRVQSAL GLLSRPCVAP TVAAPALRIQ ARWAHKSTQQ SEIPQIPAPI PFVPDVETFL  60
   61 TVIGRGLKQH ASKFPTWDAL FTLTSDQLRE LGVEPPRTRK YLLWWRQRFR EGKFGIGGDL 120
  121 KHIENGSAEL RVREEDKSPL VRVRRVVNVP PGKKIEEVSP SDMVLVNGFK VQGVRTIVGP 180
  181 YALPMKYGGA RISVTEGMWE DKRGHKVDGG ERRQAEIRFK RRVAERKALR ESQGFY

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	236	0.99