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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116197735, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPTPGKHP LSQGKTPSQP QPGAAATPSV STPFSAAAAF SPHGPRSSPQ QFKKSPTATL  60
   61 GRSTGPVNYD SPSAAAALGI LDISSLGLDL QNLGNLGKAS EDERARRLDS VIAVLGRSKG 120
  121 LVSEAGLERL AKKLELEFIW ENSMDSDDSK TLIVAGSALE LLIGFRSDIV QSVNLAFPDS 180
  181 AEIVNKHAEA AGKILFKDLQ LLEGQSPLTK SLENFAANFE RLAILDKLSI SPGLNMYEAV 240
  241 AGIYESLCRL HTWELQQVRG DPAAAAKGED HLESLVLCTR SGNPTMNTRG RVGMALDYWK 300
  301 DRRLQPPPTE PEMIEWVEEN EQVWSILIDC APLREIGVNP VRISDKWIGP DVEKVPLPDE 360
  361 LHTGGPIIDW LEPESTFVPT PDQTKADPMQ PDASILGPRL PDAVFHATFD PPVHIPTTLW 420
  421 GQIQQLGCMM DETPLKQLAT FDSLVLPYPP GKEPEAAAGS RTVTCNRQTA YAAPGEEKLT 480
  481 LKSHANTLYV SKPIPSRTLT TMTFSHPQQL ITILPYLRQY AFLATLLERS LTQDPDPTRF 540
  541 LDPADVKPAA PPTITGTTTT SQDDYDTLAN PLLTPKTDDG PEDNEKDEEE GSEGHLNIDL 600
  601 TLTMLPVPQL RVVFPFRDRT AHVTLEIQEN GHVHVDSQDV LDDSNMVAPN GRQRSGEDVG 660
  661 ALLERMEDVG KWAEFIRSRW A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle