YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|166855501, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSMTFFAA FFLIFTVASI FSGCSNKNSQ PISDTQFALD TYCTISIYDN VPKKVLDEGF  60
   61 KAIKDVEDKM SVTIKNSEVN QINENAGIRP VKVSPDTFYV IKKAVHFSDV EKGYFDITVG 120
  121 PIVKLWNIGT DKAKVPSPEE IKAKLPLVNY KDIILDEKNM TIMLKNKGMS IDLGGIAKGY 180
  181 AADKVAQVLK KEGVKHAIIN LGGDVLTIGT KPDGGNWRIG IQTPFKPRGE YLGIVEVSNK 240
  241 AVVTSGVYER YFKKDGKLYH HILNPFTGYP VDNHLYSVTI ITDTSIDGDA LSKIFVIGLE 300
  301 EGLKLAESLP GVQAIFVTDD KKVYITSGLK GNFKVTDPEY TLMTK

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	345	0.99