YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76797386, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLEEDESK PNHDRWVLTY SDMMSLLLVF FIVLYSISTV NATKFAQIAS SLSKTFTGTD  60
   61 YVLFQYNGSS FMDGNSGDKS SLGEIEKQLK GFIKENNLQG AVTSYIDERG LVISLQDSLL 120
  121 FDLGSADVRP EEKEVLIKIG DMLKSLPNHI RVEGFTDDLP IHNNKFDSNW ELSVIRATNV 180
  181 VKILVNEVGI EPARISAVGY GEYRPVVPNN SEENRRLNRR VDIVIMNTEY NKWEPKSQ

Type	Start	End	Confidence
Cytoplasmic	1	15	0.86
Transmembrane Helix	16	38	0.82
Non-Cytoplasmic	39	238	0.87