YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|167037605, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLANKLTML RLFLIPIFMF FMLVRGPYND FIAAGIFSLA ALTDKFDGYV ARKFNQITNF  60
   61 GKFMDPLVDK IMVSSALIAL VQMGRIQSWI VVVILAREFL ITGIRTVAAD KGIVIAASNY 120
  121 GKYKTTFQMI AVIALMLNNY PFSLINFPFD TIMVYIALIL TIYSGVDYII KSKNLFKD

Type	Start	End	Confidence
Cytoplasmic	1	6	0.98
Transmembrane Helix	7	28	0.86
Non-Cytoplasmic	29	85	0.77
Transmembrane Helix	86	104	0.68
Cytoplasmic	105	124	0.74
Transmembrane Helix	125	144	0.79
Non-Cytoplasmic	145	150	0.75
Transmembrane Helix	151	170	0.91
Cytoplasmic	171	178	0.90