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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88177949, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQFLSFIWL SLLSFLVIPS SASSAVDYHE QLNLRPLPLS ALLASFNFRS NTTLSEFEKG  60
   61 NFRFFPRSLG QILQHAGTRE LHLRFSLGRW DSETWGARPW DGAREGGTGV ELWAWLETET 120
  121 DEEADRKWLT LTNALSGLFC ASLNFIDGTR TTRPVMSFQP EGDHSADNNM HLLYGVLPHE 180
  181 VVCTENLTPF LKLLPCKGKA GIATLLDGHK LFDASWQSMA IDIRPICPDS GECVLQIEQT 240
  241 IDMVLDIDRS KRPRGNPIPR SPPGDQLPCD SSKSYNSHDT CFPVDHTSQE WTLSQIFGKT 300
  301 VKGTCPLADP AIPPVCLQVP HSRSVFVSKD VHEKKNSDGA SRCFHISPDT ELEMMLPRPD 360
  361 KGASTTTTTD IATPETPLLY AERSFTGHGQ ERGGVQTILR NPSPDTEVEF IYMESLPWFM 420
  421 RIFLHTMETR IAGQPHANKS LVQQVYYRPA LDRARGTQLE VRMRVPAAST VFLTYDFEKS 480
  481 ILRYTEYPPD ANRGFDVAAA VITILDPPPK DGRFAAYTLR TTSLLCSLPT PDFSMPYNVI 540
  541 IFTSTAIALA FGGLFNIVVR RFVAADEAQA TGLGVVLARL KSRLVSAVKG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle