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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88177647, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRGRNIAL AGAGCFIAWG YAINWFPVLR WAGHAFVGGV LLTIVALFAL VLLTSRGNRH  60
   61 RQFRKSARPR AAAFLAPDAW RTEVAALRHR QTYAKASLYP ESPKVSAALD EVLEYIIRDF 120
  121 IRSWYSAISN NPVFTDEVDK AIRCALLRFR DRLQAQDPAE VLTTRLVPIL TAHFRHFYDA 180
  181 ERSIRGRKLN RSVTETEELD LAIASKYKEG KLHPAASLAF SDIKTAQQDH LRQTMSKILP 240
  241 IVLPEKLLAS RAVSTLIREV TSCAVLFPVM QMLSEPDTWN QLMENYGRTM LQDRSTVRRL 300
  301 RAALDQHASP TPKAGKPVAF PRLTPVDSER RFEKFIRAIR KVNNLSDARR FRSEVASQLK 360
  361 RDSQQENVDQ VYLRRLEMGK RMLDQRVQQL AAGGSRRAYQ ETVEVDVPTE SRLEHASLVD 420
  421 LLRDPSTLSY FMEYMDRQRL MPMVQFWLVV DGFRNPLEDD GPEGEQLPLQ LPPWTESDRL 480
  481 DLAQIDAAYL SRPELHVPPS SKRIIQEFLR AGKRATPEQY YRARREILRA QSAALEEMRA 540
  541 RHLQNFKQSD LFFKALAAED ASKRTALSNA RARSHSPLPR NTPHTSKPTP VARLGPRLHT 600
  601 GPINRRGVSN ADPKTMPANG ALDFDPRRSM GEPHSPPPLF DEDEGGDDML GDSVASLDQD 660
  661 ANNTPPMPDT KVVQAMEQAL NNILEESQAP TVEDLRASLF DDDVGSSLFS PADGTPKQRV 720
  721 SPAPTPSSRP KRGSVDMTRT SGNLLDALAP PQQPRSSRGS LDARRSGELP QSSRGSLDVD 780
  781 RSGKGQDKPS LASLGLVSAA SRIGVFVDDD LFGDDEKFLS DEPSDLDDDL NADDADAVHE 840
  841 AAPGDLGLAE AITALTNDID KLNAQDAVVN SLLRKAELTN NTAELRILRK SKASLQREIR 900
  901 RKELQRQQYV IQESDNSLYG RSTIKIKSIR LDKEEDGQIH RRYSEFLELH QKLRSHYPSV 960
  961 RNLDFPRRRV VMKLQSDFLQ KRRVGLEKYL SELLLLPDVC RSRDLRAFLS QSDMMTRLYD1020
 1021 SVADGMEDIL GSIPVLDQLS LAGQNLIAAA TSQLGAMPLA ALADGDPAAA AAGGPAGVMM1080
 1081 SAAEAEAELN AFDRGGQGWL WALVQEDALL RYVGLLKQAL WPGNAGGGGG GGDGEVPRNG1140
 1141 SNVRVPRTKA EKARTRTEAG LMLATLVPDL VGSVVGRVNA QGASRRVFAA FNNARLKFTV1200
 1201 WFAWRALDGA LILRHHRCH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle