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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88176886, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.14
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPETLDLDL SRFPKLSREQ AGHVRHFWNI STSIDGQWPH MGTQDPDQAF LDAYRYQLAT  60
   61 MTYAAGVAHY HRLPAMRSLF QPLIRKLIGK MLRPEVWSYW YLTSQSGNRL DPDLNKLRQP 120
  121 WADPVVRENI MYSGHLLMMT SLYAMLFNDN EFEQPGSLTF KWDPLFWGMG PESFLYDNRS 180
  181 LQGAILKEME RRILMSLGAL RANAFMNTWN SEFVRDSYSK QALGFITDID GHIELHHPAI 240
  241 GATIRQLVQE EQADPNSAET LQRARDKYLA NRSAGFRYMQ PLFGYVVKWL SELGKAKELK 300
  301 ALLSYADAQL SPTWDKGGLY YPRQDQITDE SCHWRFMDPF TGNAAIGYAR LNVEDGQKQM 360
  361 WDKPWTRETL ASRPWVNGLN LSQGVDCLRG CWVDEEQAMV MTLKPWDSVA HELTFSIEHL 420
  421 PTGHWGCYKN GHLISEHQTV KGASVEVSMV ISPYEETDVV VIKLPQLLGV SAQLEVYYLS 480
  481 VLFFARESLR VAVQRQDSSK LSSNDTKDGK DDKDGESRDN HVSNTSAQAV VNLGYLAIAL 540
  541 GIPLAFLFGW LYLGSLSTAT LASAPNLVVS LYIYALAAIV ELVSEPAFVV MQTRLQFGTR 600
  601 ATAESSATFL RCVVTLGLAV WGANRDLGVL PFALGQLGYG LGLLAVYAWY GAGLAQREGF 660
  661 SLLPRRITTT PAKGVQHQQQ PDKPAFILSY FYRPTLQLAS SMMAQSVVKH ILTQGDTFLV 720
  721 SILSTPTSQG VYALANNYGG LLARLVFQPI EESSRSYFSR VLAPSAPTPP PTTTTSNETK 780
  781 PTTITTTSPA HTALEALQSL LRSYLLLSLA ITALGPAAAG PLLALVAGPR WADSGAAACL 840
  841 AAYMWYVPLL AVNGVAEAFV ASVASEAEVH LQSAWMGVFS VVFGLAGVVF LRVLGWGAVG 900
  901 LVVANGINMA CRIVWCVRFV RRYFGRMAGV RFDVLDVLPS PGAMLAAAVT SQVVKKVVAS 960
  961 AAPVGAREAI VELVKVAAVA VPFVIAVAVF ERRFLYAAFQ AVRGHRQSSS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle