YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|166856834, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRKLGKSG LEVSGIGLGC MRMSFGQNPL PDREEMIALI RKAVELGVTF FDTAEVYGPY  60
   61 TNEELVGEAL EPFKGEVVIA TKFGFDLYPD GRPGWRGLNS RPEHIKKAVE GSLRRLRVDA 120
  121 IDLYYQHRVD PNVPIEDVAG AVKDLIEEGK VRYFGLSEAS AETIRRVHAV CPVAAVQSEY 180
  181 SLWWRKPEEE VLPTCEELGI GFVPYSPLGK GFLTGTIDEK TQFDSTDIRS SIPRFQPEAI 240
  241 RANLALVDFI KEIARRKQAT PAQVALAWLL AQKPWIVPIP GTTKLERLKE NIGAVSITFT 300
  301 EEELREINEA LSKIPIQGGR YPEEVEKMTY R

Type	Start	End	Confidence
Signal Peptide	1	26	0.50
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	331	0.99