YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88176556, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTEQIILR NYLLVPAQLP AIISLQEFVA LFPRQLQSSP RIRTLYRDLQ SQRNAVVDDV  60
   61 AGQVEQEAKH GKAMRRAVIR SKREAEEQEQ DEEVEIERML GNWSEPRHAK HTLASILPDM 120
  121 ESAISGIEAE LQLLEEEEAS LLTSVQQTLG AMSDLRYGRL ANSQLPEQVL DGLGNLQEIC 180
  181 RTKN

Type	Start	End	Confidence
Cytoplasmic	1	11	0.47
Transmembrane Helix	12	30	0.57
Non-Cytoplasmic	31	184	0.96