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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116203501, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTRCTECGL LWSQRVPEPV KKQCTKCKWG YVKCSGCARS PPCRQPGCLQ GQRKCTACNG  60
   61 VGETLSCSSR AEFDVYHGRP MVCFFKLRSN PAMWDETVES EHIPDSCRQL WSLISSYMYL 120
  121 RREAAGYITA RWDLVTRLYE LAIFAWNYGV VNDGLMRVFW PADLPRSDHK GVVVGWRNSA 180
  181 LDVFVLTILE AVEPRNVEFA LKIGTLVRDA AHPVGRIYEL CGQSSIHVLG VSNTPDSADL 240
  241 DSSWIHVVVG PGRRVPAVTC ARASSIQLIL FERPRPERMQ YISLNPIALA LDDKHDNSRQ 300
  301 DVPDGSEDDD EKGERRRKEQ KRKLVEKLKQ HSISKRVPSE KEQALAKIVN QINCAWELEQ 360
  361 LLQKNVSRIG TRPKRSLSVS ERVVESATTA RDMMLVWMWN MFTVYVWPII KRLFVMGLMA 420
  421 HRVAAEVLLR ILEWRAQPRY AALKDISATA QQVEIRLQQF CYWPMHLWLV ANDVIIGIAL 480
  481 GSYIIDNAGW AAEEISKLLS QYTVDALQSS ISWLMGWPAG LKLNNELGAF LGDLFLWVIE 540
  541 YWSSCIEALR PILPHIIWFI GFSSFAGASM PIALFSDLLS ILTVHIYSFY LASARIYHWQ 600
  601 LNILISLFHL FRGKKHNVLR NRIDSCDYDL DQLLVGTILF TLLFFLLPTV AVFYLNFAIA 660
  661 RMVIISLKAV FDTMLSCLNH FPLFALMLRV KDPGRLPGGI RFELRDTQDF RRPVNDSSPQ 720
  721 LSSTSVIHLK SVELKFKAMF YQYFQMGQRI RKHYLSPRVL LCLLTGKFVP PLNRKNLYSL 780
  781 QYSMLPARRA GVMEMWTAVN SLPEPKKRMP VLHVPVLANG RKFPKGAVLS WKGRVVFFAS 840
  841 AADVPLACLG GRDRSDAQHT SYQG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle