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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76796204, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKNKCRYNK GGSLLENRKW YTLHATDIAE LLSTHLSKGL SSEVARQRLE EQGYNELVSK  60
   61 RGLTFFEMFL SQFKDFLVII LIIASLVSML VGEVIDSAVI IMIVILNAIL GVIQEYRANK 120
  121 ALDALKKMAA PEARVIRDGT VQVIPARELV PGDIVLLEAG NYVPADLRLV ESVNLKIDES 180
  181 ALTGESVPVE KNADIVFNEE MPLGDRANSA FMGTVVTYGR GKGIVVSTGM KTEIGMIAEM 240
  241 LESYQDEVTP LQKKLEQTGK ALGIASLVIS GIVFLLGLLR GIQFLEMFMT AVSLAVAAIP 300
  301 EGLPAIVTIV LALGMQRMVK RNALVKKLHA VETLGSTTVI CSDKTGTLTQ NQMTATKIFT 360
  361 NGQFFSISGE GYRPYGEFYI DSSKIDPKSD TCLELLLKIG ALCNDSRLEG SGTEHEDQKS 420
  421 WRILGDPTEG ALVVAAAKAG IFVEDLEKTQ PRLNEIPFDS DRKLMTTIHP FDGKYIAYTK 480
  481 GAPDVLLSLS SYIYKNGQEV PLTQEDIEAI IAANKAMASQ ALRVLALAYK PLNDLPEEPK 540
  541 AEDIEKDFVF VGLIGMIDPP RPEAIEAIKT CKQAGIWPVM ITGDHRDTAV AIAKDLGLIE 600
  601 SEAGVLTGAE LDSMSDDEMF QKSREVSVYA RVSPIHKLRI VEAIKNNGHI VAMTGDGVND 660
  661 APALKKADIG VAMGITGTDV AKETADMILV DDNFASIVSA VEEGRVIYSN IRKFIFFLLS 720
  721 CNIAEILIIF VSMLAGLPIP LKPVQLLWIN VLTDAFPALA LGMEKKEPDI MQQPPRRPEE 780
  781 PIIDTRMRWQ IAIQSIFMTV SIIGVFVFAL KYTDSIEKAR TFAFATLIFS ELLRAFSARS 840
  841 ETHSVFKIGF FTNHFMLWGT FISLILLLAV IYVPFLRTIF DTTYLSFYEM DIVIIFGLIP 900
  901 FAAAEISKIF LSSRGHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle