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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|242258479, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKANLKIT GMSCAACATK IEKGLKSLDG VLDANVNLAI EKATVIYDPD KINICDMEKK  60
   61 IEDIGYGVIK DKVELALMGM SCASCAAKIE KTLKNLPGVS NASVNFATET ATVEYDSNEI 120
  121 DTEKMIKAIK DIGYDAKEKT GVGIDTEKEI KEREINTLRK LVIYSAILTV PLVLSMFLVM 180
  181 FKVPGGILEN PWLQVFLSSP VQFIVGLRYY KGAWNNLKNM TANMDTLVAM GTSAAYFYSL 240
  241 YNVFTKPSHE IHNYLYFEAS AVIITLVTLG KLLEATAKGK TSEAIKNLMG LQAKTARVIR 300
  301 DGQELDIPIE EVKVGDIVVV RPGEKIPVDG KIVEGSSTID ESMITGESIP VEKGVGDEVI 360
  361 GATINKTGTF KFEATKVGKD TVLSQIIKMV EDAQGSKAPI QQIADKISGI FVPTVMGIAA 420
  421 TTFLIWYFGY GDFNAGIINA VSVLVIACPC ALGLAVPTSV MVGTGKGAEN GILIKGGEHL 480
  481 QRAGKITTIV LDKTGTITKG EPEVTDIEAF GNFTEEEILK IAGIAEKNSE HPLGQAIVNK 540
  541 AKEKFKILEV PEKFEAIPGY GICITINEKE FYIGNRRLMD RQNIDITPIE DKLVNLEIQG 600
  601 KTSMILASKD CVYGIIAVAD TVKSDSAKAI KELQAMGIEV YMITGDNKRT AEAIAKQVGI 660
  661 KNVLAEVLPE DKAEEVAKLQ KMGKVVAMVG DGINDAPALA TADVGIAIGT GTDVAIETSD 720
  721 ITLISGNLMG IVTAIKLSKA TMRNIYQNLF WAFIYNTIGI PFAAMGFLTP AIAGGAMAFS 780
  781 SVSVVLNALR LRRFREG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle