YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|241884376, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKLFFILI GIFLCFSIVS CGIAKKDITK AERNEALQKP LEKPKEKVSN TVNKTVYTNT  60
   61 ENLDNTLYGW GVRVLPNHQT PEITPKAMEL IKKYDAIFVG DTTKKVVYLT FDEGYEAGYT 120
  121 PKILDILKEN NVKAAFFVTG PYVKEHADLV KRMVEEGHIV GNHTVNHPSL PTLSDEKVKE 180
  181 EITKLGDMFK ELTGKKMKYF RPPKGEYSER TLYLTKSLGY RTVFWSLAMA DWQPLPGGPE 240
  241 ESYNTVMKRL HPGAVILLHA VSKDNALALD RIIKSIKAEG YEFKTLDDIP

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	290	0.99