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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116200700, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIQQPPDNG AGHFKSPVVS SDPVTSNTNI NTKDGAQPKK EPPPEKPSDI RRRSYIILSF  60
   61 WLIVVLLGLP IWWKTTTIYR ADLPLQEMLD WSDGKACRPV FPLRISIQAN ALQEQEAQNL 120
  121 LRLTQHALDD LNDFSGHHLR LQLAPPSAAE QRDRESVLTI RLVPGDATTA KFDPHEPILD 180
  181 ITYPSNAIPS PTSSSSPLAT YVASQLRSTF AEEQATISYL LSANSIPSDH RPQGLSSEIS 240
  241 DSLSKRTTRS LKYAPTYHLT FSLFTSGPLP SSWDIDGAIG EYMKPVLDVL SPIHNFTIDT 300
  301 QVQLYATPGV QNQVLNKEDL SSFINAAEWP LSPSIGGAPT VNFIVFVGHQ TIAAPAQSAG 360
  361 EDGEPGPSSH SWMMPQWGTV YLLPLPNDTS HLSAEALKQP LLTFTSHLLS LTGTPQSGSL 420
  421 PLRLSTLSRI RSADLLLRAS STLGSLARLA LALPSISIPS RVADGVSKTM HHLRLACETL 480
  481 GGPEGLAHAR IAEAEAERAF FEKSMVGQLY FPDEHKIAVY LPLLGPVAVP LVMGLLNELK 540
  541 TWLKRRKEAA KAGREKKKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle