YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|242258471, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYIYIGIGG FFGAVLRYLI TIYFTKMYHT VFPFETFIIN ILGSFLLSFI ANFAMDEYKV  60
   61 NTNLRLAITT GFIGAFTTFS TFSMETINLL KAGKDYIALS YMILSIMGGL LMSYLGFEFA 120
  121 DKIFDLLKKR EEEQ

Type	Start	End	Confidence
Cytoplasmic	1	4	0.64
Transmembrane Helix	5	25	0.86
Non-Cytoplasmic	26	31	0.60
Transmembrane Helix	32	55	0.85
Cytoplasmic	56	63	0.66
Transmembrane Helix	64	84	0.89
Non-Cytoplasmic	85	96	0.64
Transmembrane Helix	97	117	0.94
Cytoplasmic	118	134	0.69