YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68195900, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKIAVLGP GSWGTALAQT LAENGHDVRI WGNVPEQIDE INKYHTNQHF LPDLTIPESI  60
   61 IGYKELAEAV DNADAILFVV PTKAIRSVAQ ELIGKMNTKP IIIHASKGLE QDTHKRISEV 120
  121 LAEEIPEEKR QAIVVLSGPS HAEEVAVHDI TTITAASIDQ KAAAYVQKLF MNDYFRIYTN 180
  181 NDVIGVETGA ALKNIIAIGA GAIHGLGFGD DAKAAIMTRG LAEISRLGVA MGANPLTFIG 240
  241 LSGVGDLIVT CTSVHSRNWR AGNLLGQGHK LEEVLENMGM VVEGVATTKA AVELAQQLGV 300
  301 EMPITQTIYN VLYNGEDIKK AAKEIMLRDG KMENEFSLR

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	339	0.96