YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68195733, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLPNKLTVL RICMIPIFIL VVGLPLDWGQ FNVGDTTLAV TQLVGAVIFA LASITDWLDG  60
   61 KIARARGLVT NFGKFADPLA DKMLVMTAFI MLVDQGKAPG WVVAIIVCRE LAVTGLRLLL 120
  121 VEHGEVMAAA WPGKVKTATQ MVAIILLFIN NIPFSLIGIP VDQIMLYACL IFTIYSGVDY 180
  181 FIKR

Type	Start	End	Confidence
Cytoplasmic	1	6	0.99
Transmembrane Helix	7	28	0.91
Non-Cytoplasmic	29	37	0.81
Transmembrane Helix	38	58	0.93
Cytoplasmic	59	136	0.65
Transmembrane Helix	137	157	0.87
Non-Cytoplasmic	158	163	0.73
Transmembrane Helix	164	182	0.92
Cytoplasmic	183	184	0.83