YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|69277136, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPCPMFSAL AALFMLAGVA AAQDQSIVVA STTSTQDSGL FDHILPLFEE KTGIEVKVIA  60
   61 QGTGQALDTG RRGDADVVFV HAREQEEKFI EEGFGVRRFD VMYNDFVLIG PKSDPAGIGG 120
  121 SGDIAAALVA IQSRQAPFIS RGDKSGTHSA ELKLWEAASV DIETAKGQWY KEIGQGMGAA 180
  181 LNTASAMNAY VLSDRGTWLS FKNRGDLDIM VEGDRRLFNQ YGVMLVNPEK HPSVQAEAGQ 240
  241 RFIEWLISPE GQQAIGEYKI GGQQLFFPNA EQDRS

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	275	0.99