YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68189943, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVADRSKRK SGGVGETISV VVQALLIALV IRTFFFQPFS IPSGSMRPTL LEGDYLFVTK  60
   61 WAYGYSRYSF PFSPPLFSGR IWGAEPERGD VVVFKYPPDP SLDYIKRVIG LPGDRIQMRD 120
  121 GQLYINGTAV PREKIGQIED QDITDQARPV DVYRETLPNG VSYETLDLSP TTVGDNTREF 180
  181 IVPEAHYFMM GDNRDNSADS RFSVGFVPVE NLVGRANIIF FSIAGGASPL ELWRWPSEIR 240
  241 LSRMLSWID

Type	Start	End	Confidence
Cytoplasmic	1	13	0.90
Transmembrane Helix	14	36	0.86
Non-Cytoplasmic	37	249	0.89