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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87309080, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLEVLRNTE TSTAFEAAVR RRFELQMTKI YCNTDHLFAY LMPFQWIVGI LFTIFVSPLA  60
   61 WSGESSYIHP HVWFAILGGG VCCLIPFALA VYRPGKLSTR MVIACSQMFF VSLLIHLSGG 120
  121 RIETHFYIFG SLAFLAAYRD IRVLIPATLI VAADHLIRGL LWPESIFGIA AADNWRWLEH 180
  181 SAWVLFEDVF LILTIRQSLA EVHALAMKTT EGELAVERLA IAKRLAEHNE AQFRATFEYA 240
  241 AVGVAHIGFD GYWLRTNKKI CEMLDYSEQE LQRLTFADVT CPEDKEIDDR HLQDFLNGEI 300
  301 EEACFEKRYV NRNGEIIWAR LTISVIRDDA YFIVVIEDIR EERQAREDLE KSNREIHKLS 360
  361 LVAAKARQSV IIADKFGRIE WVNDAFTQLT GYALPEIIGQ KPGTLLQGPE TDPSTAAYIG 420
  421 ERLRSRERVS VEIVNYSKSS EKYWIALEIE PVFDEQHRLI QFIATQTNVT HRKKHEAELR 480
  481 RAKETAEAAN AAKSEFLANM SHEIRTPLNG LLGFTDLLLR GAANDPQKRD EYLQIIRTSG 540
  541 RNLLDVINDL LDLSKIEAGK LETESLPCDP QAVVAEVVSI LRVKADEKAL RLTCDWSGEV 600
  601 PPQIVTDSVR LRQLLTNLIG NAIKFTQFGS VSIDAGWHAP LQQLTFVIRD TGIGIPEEKL 660
  661 DLIFDPFTQA DATTTRRFGG TGLGLAICRR IARLLGGDVS VESEIGAGST FTVTIAAPLY 720
  721 DAPPTLDGKQ AGEITARKKA PPNGSLQFAG VRVLVAEDGP INRLLVENML APLGFELTFV 780
  781 EDGQMALQRF EESRFDVILM DMQMPVLDGY AASERLRATG CEVPIIAMTA HAMASDRRKC 840
  841 LDSGCNDYIS KPVMLEQMLA IIESNLPAAA ALDQPLLSPT IEPPSENAAP SPTSDLPLVS 900
  901 DVLPSLATLA PVVDRFVMTL PDSLSEILEA AENADWAKVE ILAHRLRGAS GGCGFHSLYE 960
  961 IASTMEESAR SQKQTPSPDR GQAILTDHGR LFKMLPRLED STGNRPHAAN PSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle