YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39234
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNPWIITL FTTCFWVDVG SQISVDIPPL RASELIIPVS NRFQLIRSAP VTTRSISPFQ  60
   61 VMQKLADVPD DGETFREGPL DINGRLTARL VWKSFEADIN QRIEGEWMWV PLKVLSAYGQ 120
  121 IVSGMQYDLK VLAGTSNCSR YQVNAYTIQE QNCVHFNGPK RAKPLNCPEL PDKAHAYDDN 180
  181 FVRTKIVPMT AAANNVNPEK CFKSRIPTMS ISKTFSTNCS EVGPQSNCFG FTSFDTTQKV 240
  241 LVMSFRGTDS PLQLTDEILD FFTGKKQFFP DAGNIFTYFY DAFFFLWNAG LQQDIRQLKY 300
  301 KYPDYELWVV GHSLGGAIAS VAASYVVHTG LFTGDKVKLV TMGQPRTGDY DYATWHDKTF 360
  361 PYSFRIVHHK DIVPHIPPQE GADKLFHHRT EVWYNNNMTT TDPYHICAEA DGLYCSNRQL 420
  421 DTDIPDHLTY FGVFFPDWHF TC

Type	Start	End	Confidence
Signal Peptide	1	21	0.57
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	442	0.93