YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|87289737, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTVLVTGG AGFIGSCLVR QLVLQDDLTV INLDKLTYAG NLDSLAELAD DSRHILVEGD  60
   61 ICDADLIARL LAEFRPNAIF NLAAESHVDR SIDGPAEFVA TNVVGTFTLL EAARNYWREL 120
  121 AADRAAEFRF LQVSTDEVYG SLGKTGLFTE ATPYSPNSPY SASKASADHF VRAYFHTFGL 180
  181 PTLTTNCSNN YGPRQFPEKL IPVMILNALE GKPLPIYGDG QNVRDWLFVE DHCRAIRRVL 240
  241 QQGRPGEVYN IGGNCERTNL EIVTAVCAAL DRLCPDLAHR PCEKLITFVK DRPGHDRRYA 300
  301 IDAAKMKSEL QWSPVETFET GLEKTIRWYL EHRTWLDRIA SGGYRRERLG LCEIGKIG

Type	Start	End	Confidence
Signal Peptide	1	21	0.73
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	358	0.99