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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87306843, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKDPICGMD VDPNNAISLE RDGETFYFCS EHCRTKFAAK SAENAPEADD AEHSCCHAHD  60
   61 QQHAAHGDQL TQLSTAAPQK SSPPQSTAAY ICPMCPGVES DKPGSCPKCG MSLEPNPTAA 120
  121 KAKKKTIYTC PMHPEVEQDH PGSCPKCGMD LEKKDVTADS DEHENDELND MTLRFWIATA 180
  181 LALPVFVLAM GPMVGVPFHQ WLGSAYVWVQ LALSTPVVLW AGWPFFVRGG RSFLTGHLNM 240
  241 FTLIAVGTGA AYLYSVLGVL LPGMIPDTFK HEGQVEVYFE AAAVIIALVL LGQVLELRAR 300
  301 KKTSGAIREL IALAPPVAHR VTDGKEEDVD LDEVHAGDLL RVRPGEKIPV DGRVTEGESS 360
  361 VDESMLTGEP NPVKKSTGEE VIGGTVNGTG SFLMEAEKVG EETVLSHIVD MVANAQRSRA 420
  421 PIQRIADQVA GYFVPAVLAI SLLTFAVWAI ARPEEPALAW ALVNAVAVLI IACPCALGLA 480
  481 TPMSIMVGVG RGAAEGVLIK DAEVLERLES VNAIVVDKTG TLTAGKPKLT EFEALEKLSP 540
  541 SGVLRMAAAV EQNSEHPLAR SIVDGAEEQG IDLPSVTKFD SIPGGGVSGE VEGRQVLIGN 600
  601 ASLLEERKIE NAGALNDRVA ELQTQGRTAM FVALDGKLAG LVAVADPIKD STPEAIRQLH 660
  661 DLGLKVIMLT GDNQRTAASV AKQLGIDDFT AEVRPEQKQQ RVTQLKEEGY IVAMAGDGVN 720
  721 DAPALAAADV GVAMGAGSDV AIESAGVTLV KGDLRGIVRS VQLSRRTMQN IRQNLFFAFA 780
  781 YNVIGIPIAA GVLYPISHHL LLNPMIAAAA MSFSSVSVIA NSLRLRSVKL D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle