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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87290507, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPVIRVEG LSRSFGDLVA VDDVSFEVRR GAIFGLLGPN GSGKSTIIRM LCGVLEPSSG  60
   61 DASVLGYDVH KDPEEIKRRI GYMSQKFSLY SDLSVRENLD FYGRIYGLTD ERLAERRQAV 120
  121 LELTNMNDRI DQLGGNLSGG WKQRLALACA LIHEPDVLFL DEPTAGIDPV ARRQLWDLLF 180
  181 ELAAQGVTLF VTTHYMDEAE RCTDVGYIFM SKLLVLGRGE ELKQLPDVTP EGTKRIEIDA 240
  241 HNPSTGLTKL IHVRQVRDAT LFGEMIHALV DDSYTHEQLA ADLGTTADKL PIREIAPTLE 300
  301 DVFVTLTKNA EERHNSGEPA KTVRLESAID NSEENVEEAS APSPALRQKH ESTLTGRSTD 360
  361 GLLAVFVKEM SHIRRQPSTL FFMFVVPVMQ VLIFGYAIDI QIENIPMVVY DLDGRQDSQR 420
  421 LIDSLVNTRK LKLIGKVYDE ESFQRSLTSG RAKVGVLIPP NYSDSLAQGR QAQVQVLIDG 480
  481 SDSQVATTAQ NAVALLGLNL SIGRAKSAAT DAQRAPARDQ WGELALPIDV RPRLLYNPDL 540
  541 ESARFFVPGL VGIILQLVTL FLTAFAIVRE RELGTLEQLF VTPVGRAGLV LGKLVPYSII 600
  601 GMVEMLLVLT VMVYVFGVPI RGNLMLLIVL SALFIVCSLG LGLLVSTLAK TQVAALQFAF 660
  661 LIMLPSVLLS GFMFPRSEMP LPIYLVTFAI PVTYFIEILR GIVLRDADFI DLVPSIVGLS 720
  721 ICCLVILTAS IARFRKQLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle