YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|87305545, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIFLTFFI VINYIQAASL EEIKTALAKE FRNNFPKIII SQIDLKTTSL PKDFDQYEFL  60
   61 RIANGRFNQA QGFLRAEFKT PQNIQKNVFF RYFIQANLEV LKSERAIKRG DKLGAFDYKS 120
  121 VLIDFDKVPL NALTLDDVDN LVAKSNINKN AILRANMFKT TALIRRNDPI IGVLSEANVD 180
  181 VLIELVALQS ANMGERIRAK NKEGKVMQGI VVGKNRMIIQ

Type	Start	End	Confidence
Signal Peptide	1	17	0.94
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	220	0.99