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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95931277, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLAERSPD HRDLAVLVDG CSDCGACLRQ CAFLKRYGSP AAIQQLYEQD SQQGKLAFSC  60
   61 SLCGLCNVVC PAELPLDQYF LSMRRHYIVE HPEHLKKYGG LRFYESIGTS KAFSHYALPA 120
  121 NCTSVFFPGC ALTGSRPERT WELYQHLRSE QPSLGLVLDC CTKPSHDLGD VDRFNEKFFP 180
  181 LRAFLENNGV NTVITACPNC YQVFKRYAPE MNCRSVYEVL DTTILPSRPD TTGTITIHDP 240
  241 CVSRGEPHVH EAVRSLIDKV GLECQEMKNT RKTALCCGEG GCVMAEDKEL ALSWRQRRAD 300
  301 QADQRLVVSY CAGCVDALRP EASASHVLDI VFDPLTALDR KQKSPGSLKR YMNRLQLKKR 360
  361 ARKQIACRVR GDRRMTTTEQ KKKSRLGQVI VLALLIAAIV TLKMTGAADY LQPEKLRDWI 420
  421 AGTGFWAPLI FMVLYTAAPA LFLPGLPLTI LGGILFGPFW GVVYTITGAT AGACVAFLVA 480
  481 RYLGRDWIRS KLTAPRWQKL DEDVARNGWK VVAFTRLIPL FPFNLLNYAF GLTNIRFSHY 540
  541 ALTSFICMLP ATIAFISLSS SLGELIKGQV SKEFIIGIIL VVALSLLPMW WKKRQGKRRE 600
  601 EQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle