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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95134951, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYRPSKKST FLSTASGIAL TYALISLLWI YLSDSLLLAL GIDLLSLSKL QTWKGSVFVF  60
   61 CTAMVLFFLL RNAIKRALYG EALFRKVVET IPTGIWVVDR EGNVVDCNFA AHGLLQEFGI 120
  121 QAYNDIQGYA EIQGWWSDNG QPVHPDEWGI SRSLSRGETC LREKIDIACT DGVRRTVLYT 180
  181 SLPLKSENGA ITGAMALVQD ITEKRKTDEV LRRFRFSIEQ ASEAIFWIND EGRFLFVNDQ 240
  241 ACHSLGYSAS ELESLHLWDI DPDFPAERWA EQWERMKSDP KQVFETRHQR KDGRIFPVEV 300
  301 SASQCLFNNE ENHVAFVRDI TIRKKYEKEL EHQSNHDALT GLANRVLLDD RIQQAIVHAE 360
  361 RAQRNTAVFL LDLDRFKVIN DSLGHSQGDA VLLAVAERLS ACISPGDTLS RLGGDEFAIV 420
  421 MTHVNHPADA RIMAQKILNA FEQPFPLGNR ELRITTSIGA SLYPRDGEQS EDLLRHADAA 480
  481 MYQAKKQGGN GFQFCSEEMD TRAHKALELE GDLRQALQLG SFVLHYQPKV KIASGKIDGC 540
  541 EALVRWNHPD KGMISPDDFI PLAEETGLII ALGEWVLREA CRQFKAWQAQ GLPPIKIAVN 600
  601 LSARQFLQSD FVESIQTILH EFDIDPHWLD LELTESMVME DPDRIAKLLA ELKQIGFALS 660
  661 LDDFGTGYSS LNYLRRFPID CLKIDRSFIL DVASDATAAS VANSVIGIAH SLGIHAIAEG 720
  721 VETREQYAFL AMCECDSIQG YLFSKPLPAN DLAALLANPT PFKPTT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle