YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68178997, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPVTPRRD LSHRSNAGIG RMLVLSFILH VLLFALMGGY LVPRFEKPQK PVYYVDLLNK  60
   61 PVAKPRAGRP DAPAKKKAPK KKKPVIKKAP AVTKPPVKKK PVTVKKAPAE VVKTQPKATQ 120
  121 KTPVVKQPAD VPTKTVEKNY QEETLDAIER LKRKQRINAL KQELNALATR DIPTTDTIDA 180
  181 PVGEVGGQGD EVGVGFDSWI KEYLSQAWAL PRHYWERGLK AKMVLQFNTS GRLAHYEMLS 240
  241 PSGDSFFDAS VKRAVQQLTQ LPSKPARPLE LIVTFDPKEM LMR

Type	Start	End	Confidence
Cytoplasmic	1	18	0.94
Transmembrane Helix	19	41	0.93
Non-Cytoplasmic	42	283	0.98