YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76164402, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGTRFPSLR RLVLVVALLM VVSSLPFGPV HHSTARAQTS SPRTVFVHLF EWKWTDIAQE  60
   61 CENFLGPRGF AAVQVSPPQE HAIVAGYPWW QRYQPVSYQL TSRSGTRAEF ANMVARCKAV 120
  121 GVDIYVDAVI NHMTGVGSGV GSAGSTYSPY NYPGIYQYQD FHHCGRNGND DIQNYGDRYE 180
  181 VQNCELVNLA DLDTGSSYVR DRLAAYLNDL ISLGVAGFRI DAAKHIAAGD IAAILSRVNG 240
  241 SPYIYQEVIG AAGEPITPWE YTNNGDVTEF KYSNEIGRVF LNGKLAWLSQ FGEAWGMLPS 300
  301 DKAIVFVDNH DNQRGHGGGG TVVTYKNGVL YDLANVFMLA WPYGYPQVMS SYEFSNDFQG 360
  361 PPSDANGNTR SVYVNGQPNC FGEWKCEHRW RPIANMVAFR NATASTFSVS DWWSNGNNQI 420
  421 AFGRGDKGFV VINREDTTLN RTFQTSMAPG VYCNVIVADF TNGTCSGQTV TVDSNRRITV 480
  481 SIPPFSALAI HVGAKLSTQP ATVAVTFNVN ATTYWGQNVF VVGNIPQLGN WNPAQAVPLS 540
  541 AATYPVWSGT VNLPANTTIE YKYIKRDGSN VVWECCNNRV ITTPGSGSMT LNETWRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle