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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68177767, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKKI LIIGAGPIVI GQACEFDYSG TQACKALKDE GYEVVLLNSN PATIMTDPDF  60
   61 ADRTYVEPVT PAVLAKIIEK ERPDALLPTL GGQTALNTAV AVAKDGTLDK FGVELIGAKL 120
  121 PAIEKAEDRT LFKQAMDSIG VAVPRSGLAH NYDEAMVVIE EVGFPAIIRP SFTLGGTGGG 180
  181 IAYNREEYEA MAVAGIDASP TDEILVEESV IGWKEYELEV MRDLADNVVI ICSIENFDAM 240
  241 GVHTGDSITV APAQTLTDKE YQILRDASLK IIREIGVETG GSNIQFGINP KDGRLVVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLSVGY TLDEIPNDIT RETFASFEPT IDYVVTKVPR 360
  361 FTFEKFPSTD PTLTTQMKSV GEAMAIGRTF KESFQKALRS MEIGSDGFES RLFASPADVT 420
  421 TPLSAGDLEQ LRDKLRVPNV DRTWYLGDAL RAGLSVDEIY QISGIDPWFV NNIGQIIAKE 480
  481 KQLYDCRETI LTATEQGLDL LREAKQYGFS DRRLAYLLGT DEGVIRQLRY DHAIRPVYKR 540
  541 VDTCAAEFEA FTPYMYSTYE EECEANPSDR KKIMILGGGP NRIGQGIEFD YCCVHGVFAL 600
  601 HDDGFETIMV NCNPETVSTD YDTSDRLYFE PLTLEDVLEI VAVENPDGVI VQFGGQTPLK 660
  661 LAVALEKAGV PIIGTSPDAI DRAEDRERFQ ALLHKLDLKQ PANGLARSFE EAETIAEQIG 720
  721 YPVVVRPSYV LGGRAMEIVY GIEQLRNYMK FAVQASPEHP ILIDKFLDHA IEIDVDALAD 780
  781 GTDVVIGGIM QHIEEAGIHS GDSACSLPPY SLAEELVEEV RRQTRALALE LGVIGLMNIQ 840
  841 FAVKDNVVYL IEVNPRASRT SPFVSKATGR PLAKIAARLM AGKTLKELNI LDDIVPDHVA 900
  901 VKESVFPFAK FPGVDTLLGP EMKSTGEVMG LDKDFGKAFA KAQMGAGVNL PLSGKVFISV 960
  961 KDSDKPETIA IAKKLVDAGF SLIATGGTAA TLQENGLPVE RVNKVKEGRP HCVDAIKNGD1020
 1021 IAMVFNTTFG IQSIADSYSI RRSALMYSVA YFTTVTGMDA AVDGILAMQR ETLDVVALQE1080
 1081 YSLKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle