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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68177612, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMGTTIVLL TSFLLILCSL LLWIMAQQAK EKNGLRVLSI AILLTALGLG LQQQLHLSEN  60
   61 TTSLARFLLV ILFCAGVIKI YHSRRSTQRN ANHDSRPEQF YAFFQHGGAG MYSYDTAGRI 120
  121 LNANPAFCSM IGYSEHELKS MTILDVTPPQ VRDETLNRLA RFRDKLNEPC NFEKTYLCKD 180
  181 GSTLIGHFTG KWIVSDNDSI YAVALVQDIT EHKNADQAVL KEREFLQTVI DGIADPIMAI 240
  241 STDYHVILAN RAARESHPEH ALQPGPTLCY QLSHGSDTPC SDTNQKCPLC QVLKTGKEAR 300
  301 EIHEHLRAGH EKRTYEIKAS PLYNEDHSIR GIIETSRDLT DILNSEAELN EKTQHLQFVT 360
  361 THDQLTHLPN KELFFDRLER ATFKTHRSPF FTALLFIDLD RFKHINDSLG HEIGDQLLQE 420
  421 VAKRLSTSIR KTDTLARMGG DEFLIIIEDI KELSHVSTVA KNFIDTILPS FTIDGHELFI 480
  481 TPSMGISIAP TDTQHPKELL AFAEIAMYQA KGLGGNKCQF YTAEMNSRAK TRIELESYLR 540
  541 KAVNQDQFVL YYQPQFDIQS GELVGCEALL RWQHPQMGMI SPNDFIPLAE ETGVIIEIGE 600
  601 WVLQEACLQN KKWQDAGHSP IRVAVNISPR QFREPGFLEM IERVVQTTGI KPEWLELEIT 660
  661 ESLLMDDIDS AINILKQLKA KGIHLAIDDF GTGYSSLSYL KRFPLSRLKI DRSFVRDITT 720
  721 DDNDASITKA VIALAHSMNL KVVAEGIETQ EQLLFLKEKG CEVGQGYLYS PPVAKEPFDH 780
  781 FFTDGSPDNR E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle