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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95133648, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPFFILRPR PLKMTTYLMA IAFLFAVLFI VLLSGYSYLD NRKTVVVEIR KNAHHNQRMV  60
   61 EAVLEQRLKT LDTALKNASQ IVAKHYSAST PVASHQAITN SLMAFYERDP GGALDLLCLK 120
  121 LNDGAMIDVT SPFFASPQLQ HTLTTNPSAL AYCPGTGTVL LQQQEKITAL SSGRIIGTIY 180
  181 AATVVNDNLE LLQELEQRIT AEAITLQWNN QPILGHGRNA INQSQIEGEF IPEGFPRQAG 240
  241 EFFYIDNRLT INNQTSDLLA TQKLSGDLLT QLNESLRQGI LSVFFATLIS AGGVIIIFRY 300
  301 LTQRSLNTVL QMTEAAFRNT EPARYKPTLV SEFNILGHSI VDLDHQRKES EKQLLLSSSV 360
  361 FDNAVEGIVI TNLDGIIEQV NPACEAMSGY RLKELIGENP RIFRSDHHNS AFYQQMWQSL 420
  421 IEEGRWEGEV WNRRKNGEVY PLNVSISRCT NSAGIPSHYV AIFHDISEIK RSEEKLQHQA 480
  481 YHDALTNLPN RKLFHDRLSV AVAHARQHKT KLAVIYLDID NFKYINDSLG HHYGDKLLQQ 540
  541 ISERLLSCTR QEDTTARLGG DEFIILMPEI EDPHDITVLC RRILKQLELP HALSGRDYTV 600
  601 NVSMGVTVFP DDADTPEDLI KNADIAMYRA KEAGKNGYQL FTAAMQQTIM QRIELEARLS 660
  661 DALCRNEFVL FYQPQVDLES EHVIGAEALI RWQKPDGQLV YPDEFIPIAE ECGLITQIDH 720
  721 WVLKAACRQA NKWREQSGRN FKMSVNLSSE QFAKDQELVQ RVKNVLNKTG LPAECLTLEV 780
  781 TENAVMSDTE SAIAIMTQLT ALGVSIAIDD FGTGYSSLSY VKNFPARYLK IDRSFVKDIP 840
  841 GDSDDMAIAA SIISLGRNLN MEVIAEGVEE QTQIDFLKQH RCQQVQGYFY GKPCAAEFFS 900
  901 QQFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle