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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87125678, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRSDLRRI LLLGSGPIVI GQACEFDYSG TQACKALRAD GFEVVLVNSN PASIMTDPDM  60
   61 ADRTYVEPLT PEVVTRVIEQ ERPDALLPTM GGQTALNLAV ALSENGTLER YGVELIGADL 120
  121 QAIQKAEDRL LFKQAMERIG VKVCPSGIAS SLEEADAVGA AIGSFPRIIR PAFTLGGSGG 180
  181 GIAYNPEDYA AICKSGLDAS PVSQILIEQS LLGWKEFELE VMRDLADNVV IVCSIENLDP 240
  241 MGVHTGDSIT VAPAQTLTDR EYQRLRDQAI AIIREIGVAT GGSNIQFAIN PVDGDVVVIE 300
  301 MNPRVSRSSA LASKATGFPI AKIAARLAVG YTLDEILNDI TGKTPACFEP TIDYVVTKIP 360
  361 RFAFEKFKGS PAILTTAMKS VGEAMAIGRC FEESFQKALR SLETGLSGWG CDRDEAVWSK 420
  421 TDLERALRTP SPDRILAVRA AMLAGRSDGE IHELSRIDPW FLAKLRQLIS AEQRLLQGQQ 480
  481 LKQLSAEALL ELKQLGYSDR QIAFAVGSDE LAVRSQRDRL GVRPVFKTVD TCAAEFASTT 540
  541 PYHYSTYERP VQRLNAEGHL ETLAPESEVQ PEERAKVMIL GGGPNRIGQG IEFDYCCCHA 600
  601 SFAAQERGFA TVMVNSNPET VSTDYDTSDR LYFEPLTLED VLNVIETERP EGVIVQFGGQ 660
  661 TPLKLALPLL RWLETEPGLK TGTRILGTSP ESIDRAEDRE QFEAILRQLD IRQPRNGLAR 720
  721 SEAEAREVAA AVGYPVVVRP SYVLGGRAME VVFDQEELDR YMAEAVQVEP DHPVLIDQYL 780
  781 ENATEVDVDA LCDASGTVVI GGLMEHIEPA GIHSGDSACC LPAVSLGAEA LATIRRWSKA 840
  841 LALALKVQGL INLQFAVQRD TSGKEVVYII EANPRASRTV PFVAKATGQP LARIATRLMT 900
  901 GESLEQVGLL SEPVPPLQAV KEAVLPFRRF PGADSLLGPE MRSTGEVMGS AADFGMAYAK 960
  961 AELGAGDGLP TRGTVFLSTH DRDKPALVPI ASRLIDLGFQ IIATAGTSTV LADAGLAVTP1020
 1021 VLKVHEGRPN IEDLIRSGSV QLVINTPIGR QAAHDDRYIR RAALDYNVPT VTTLAAARAA1080
 1081 VEGIDALQHQ QLEIHALQDV HASPAAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle