YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254229288, gi...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIALLRVFAV AIFAIVMFIG GCGYCLLSPR NPKHVFTFGR LFAKMSRVFG IKLELRIPED  60
   61 AYSRGQHVYI ANHQNNWDMF TVSAAVTPKV VTVGKKSLAW MPLFGQLYWL TGNILIDRAN 120
  121 RSKAKGTIDQ VVSSMKESDV SVWMFPEGTR SRGRGLLPFK TGAFHAAIGA GVPIIPIVCS 180
  181 STNKIKLNRW NNGHVIVEML PPISTEGYGK EGIRELANIC REQMKEKLES LDEEVKQRNA 240
  241 A

Type	Start	End	Confidence
Cytoplasmic	1	6	0.50
Transmembrane Helix	7	28	0.84
Non-Cytoplasmic	29	241	0.59