YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151938191, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPIFGRGPS LQLRLFFAVI VSASLMLADS RLDTFSNVRY LLNSMVAPIQ YAANLPRSMF  60
   61 DGVFERFNTR QALVEGNRNL KREVLRLKSE LILLEQYKEE NQRLRKLLGS SFVRDEKKVV 120
  121 TEVMAVDTSP YRHQVVIDKG QIDGVYVGQP VINEKGIVGQ VTFVAAHNAR VLLLTDAKNA 180
  181 IPVQVIRNDI RVIASGNGEM DEIQLEHIPT STDIQVGDLL VTSGLGGIYP EGYPVATVTN 240
  241 VDHDTRQEFA SIKAEPVVEF DRLRYLLLIW PNEDRQHKVL RSNVDEGLEQ EEQEVTDGQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.88
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	299	0.99