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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75856163, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTPRLLQF WIVCLVVLAS LAQGAVSEQE MQQQKAVQPE AKQKVEVGVL AIRGHLYAEQ  60
   61 RWQPTIDWLN QQISDVYFEL HPLNLDEMGE AVKFQTMDFI LTNPGQAVRL GRQYALSWMA 120
  121 TLTGRAPQNS NYSIGSALVV RANSPYQTLK DVSGFPVAAV SEKAFGGYLT LRYQIVEMGL 180
  181 DPNDFFADVR YLGFPIDANL YQLRDGNVEA AVVPACLLEQ MQNEGLLQHG DFRVLNQQPN 240
  241 EHSSCAVSTP LYPNWSFAKT ERGSSLLAKK IAQVLLAMPP EHPAIIAAGA SGWTSPVSLL 300
  301 SIDKLYQALD LHPLQQPWWS EALRWLRSHQ EWAWALFMFV IVLNAYHFWL EYRFSKSKQA 360
  361 LELTSLRLKE KSEQLEHSQR VAIVGEIGSS LAHELNQPLA AIRNYSEGGL LRLAKKRPHE 420
  421 DIVPVLEKIQ GQVERADAII QRLRTLIRKR SVDKAPCDLQ VLIDDTIELL HFRMQKQNVA 480
  481 IVTSVEGDMR PLLADSVGVQ QVLVNVINNA IDACALFQEK YHSSGYQGKI ALHCDYQANQ 540
  541 LSIRILDNGT GLQQDNPTQA FVSSKAEGLG LGLAICRDVM EMHGGEFLIA STTPHGCLVE 600
  601 LVFPYQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle