YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254228164, gi...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYRYDSDLE FLGAIKSEDL SDLVYCLTHD KDGEERFTEE LTQHAKYKRH YPDHSMYWEE  60
   61 IAAEIQCFGA NTFVTLLRGG KGVEYKEVLT DVCDKMKVNY NKNSSVEKIE QNLLMKILEE 120
  121 AIEKMSPEEL KELALSTGVK NTSGITKEAM VGVFQAVFRA GGFKSYQLTL IIVNAVAKAL 180
  181 IGRGLTFAGN AALTRTMAVL TGPIGWAITG LWTAVDVAGA AYRVTIPAVI QVSVLRQKHI 240
  241 YEKQAEEVEF S

Type	Start	End	Confidence
Cytoplasmic	1	167	0.68
Transmembrane Helix	168	187	0.43
Non-Cytoplasmic	188	203	0.51
Transmembrane Helix	204	226	0.51
Cytoplasmic	227	251	0.51