YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75856748, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEQLQGAD APKGKGKLLI IIIAVVVLLL GGGAAAFFLM GSDEPAQAEA SQQVQAKASD  60
   61 ASPIAYVNLP QAFVFNVTGD RRDRLVQIKA QLMVRGAENE ELARYHSPLI ESSLLSTFAS 120
  121 ATVDQLRSPT GRVELRDRAS EDIKAALNAA VGKPVIEKVL FTDFVIQ

Type	Start	End	Confidence
Cytoplasmic	1	17	0.90
Transmembrane Helix	18	41	0.89
Non-Cytoplasmic	42	167	0.89