YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|87123070, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSVREAIV GFSIVGAIAA FAGAMLWMRG IRLGAETWTV TVSFDDAGGL DARSPVTYRG  60
   61 ILVGSVRSIN VTPEAVLATL EINEPDLRLP LPVTASVGAA SLLGGDAQVN LISQNKPLPA 120
  121 DAPRPKSKRC SGSSVLCDGA QISGVEAPSL DTVTASMQRL LQQAEQEKLV SNLVGSTKQF 180
  181 DATAEDVQKL IEQLSREVAR AQPTINNLNK ATAEAAEASV HIKNIAAAFD NPQTVNQLKQ 240
  241 TVSNARSMTQ KFDAVGGDVE KLTSDPTFMK AVRDVTIGLG AFFQELYPAQ TSQP

Type	Start	End	Confidence
Cytoplasmic	1	7	0.81
Transmembrane Helix	8	28	0.82
Non-Cytoplasmic	29	294	0.93