YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75855694, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNRELYRDP VNGKISGVCA GIANYFGAEV WLIRIVVISA ALLGGTFLVL LAYVAMAFML  60
   61 EKQPVTYSEN IRAQQEHTLK SKPWQKGQSP DQLLSVLERD FDRLDGKIRN MEAYVTSDTY 120
  121 RVNREFSKL

Type	Start	End	Confidence
Cytoplasmic	1	10	0.64
Transmembrane Helix	11	28	0.40
Non-Cytoplasmic	29	30	0.52
Transmembrane Helix	31	57	0.82
Cytoplasmic	58	129	0.72