YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116185050, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLKKTLAS FGIGSAKVDS ILNQDVLYPG QSVDVSIHVY GGATEQAIDN IDLKLCCRYI  60
   61 AEAPDDRGAR EGHSMRRVPQ THVLAKWSLP YAFTIHSGEE RTFDVQLDVP WNTPVTIGDA 120
  121 KVWLETGLDV AAALDPTDKD ILTVRPDPLM DAVLSAFEAQ GLRIRQVECE EVKGFDLPFV 180
  181 QEFEMVPTDG PYHGVWRELE FVAHRSEQQL KLWFEVDRTR KGEGGMLASL LGSGKLKREL 240
  241 TIPATTKLDQ VGELVLNYLD QTTAVHES

Type	Start	End	Confidence
Signal Peptide	1	20	0.55
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	268	0.99